Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transcription elongation factor grea | SALA_RS04975 | Q1GUG9 | + | 1013324 - 1013800 | 17203.3 |
| rhomboid family intramembrane serine protease | SALA_RS04980 | Not Available | + | 1013814 - 1014449 | 22043.8 |
| nudix hydrolase | SALA_RS04985 | Not Available | - | 1014542 - 1015090 | 19405.1 |
| tpm domain-containing protein | SALA_RS04990 | Not Available | - | 1015092 - 1015778 | 24729.9 |
| ygcg family protein | SALA_RS04995 | Not Available | - | 1015790 - 1016635 | 29223.6 |
| lema family protein | SALA_RS05000 | Not Available | - | 1016637 - 1017239 | 21651.7 |
| large conductance mechanosensitive channel protein mscl | SALA_RS05005 | Q1GUG3 | + | 1017357 - 1017779 | 14980.5 |
| Tmrna,resume consensus sequence (at 214): aataagtgctaacgataa | Not Available | Not Available | + | 1017844 - 1018190 | Not Available |
| helix-turn-helix domain-containing protein | SALA_RS05010 | Q9HV30 | - | 1018327 - 1018740 | 15435.5 |
| cation transporter | SALA_RS05015 | Not Available | + | 1018809 - 1019432 | 21461.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.