Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ycei family protein | SALA_RS04925 | Q32E67 | - | 1000692 - 1001333 | 22080.1 |
| duf6975 family protein | SALA_RS04930 | Not Available | - | 1001562 - 1002233 | 23159.9 |
| pspc domain-containing protein | SALA_RS17300 | Not Available | - | 1002509 - 1002805 | 10656.8 |
| rna polymerase sigma factor rpod | SALA_RS04940 | P33452 | - | 1003132 - 1005141 | 75715.5 |
| dna primase | SALA_RS04945 | Q8FDG5 | - | 1005177 - 1007054 | 68544.4 |
| giy-yig nuclease family protein | SALA_RS04950 | Q038L1 | - | 1007051 - 1007464 | 15173.9 |
| gatb/yqey domain-containing protein | SALA_RS04955 | Not Available | - | 1007587 - 1008039 | 16131.7 |
| glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | SALA_RS04960 | O50235 | + | 1008171 - 1009442 | 43887.9 |
| hypothetical protein | SALA_RS04965 | Not Available | + | 1009442 - 1009906 | 16255.2 |
| carbamoyl-phosphate synthase large subunit | SALA_RS04970 | O50236 | + | 1009907 - 1013227 | 119386.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.