Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| site-specific dna-methyltransferase | SALA_RS04875 | O30569 | + | 991065 - 992204 | 41853.4 |
| dihydropteroate synthase | SALA_RS04880 | P0AC14 | + | 992319 - 993449 | 39564.6 |
| helix-turn-helix transcriptional regulator | SALA_RS04885 | Not Available | - | 993446 - 993781 | 12799.3 |
| srpbcc family protein | SALA_RS04890 | Not Available | - | 993781 - 994434 | 22971.5 |
| sigma-54 dependent transcriptional regulator | SALA_RS04895 | Q9APD9 | - | 994533 - 995963 | 50500.3 |
| hypothetical protein | SALA_RS04900 | Not Available | + | 996202 - 996324 | 4228.38 |
| nad(p) transhydrogenase subunit alpha | SALA_RS04905 | Q2RSB2 | + | 996335 - 997456 | 38368.2 |
| ph domain-containing protein | SALA_RS04910 | O34593 | + | 997463 - 997828 | 13634.4 |
| fasciclin domain-containing protein | SALA_RS04915 | Not Available | + | 997927 - 998535 | 20118.9 |
| 2-isopropylmalate synthase | SALA_RS04920 | A4XY24 | - | 998579 - 1000243 | 60246.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.