Xanthomonas campestris pv. vesicatoria str. 85-10

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Description

The Xanthomonadaceae are a family of Gram negative bacteria belonging to the order Xanthomonadales in the gammaproteobacteria. They are typically characterized as environmental organisms and are found in soil and water, as well as plant tissues. Many Xanthomonadaceae, especially species from the genera Xanthomonas and Xylella, cause plant diseases. Only one, Stenotrophomonas maltophilia, has isolates known to be opportunistic human pathogens.Xanthomonas campestris pv. campestris causes black rot, which affects crucifers such as Brassica and Arabidopsis. Symptoms include marginal leaf chlorosis and darkening of vascular tissue, accompanied by extensive wilting and necrosis. This bacterium is grown commercially to produce the exopolysaccharide xanthan gum, which is used to control viscosity and as a stabilizing agent in many industries. (HAMAP: XANCP)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXanthomonas
SpeciesXanthomonas euvesicatoria
StrainOct-85

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Xanthomonas campestris pv. vesicatoria str. 85-10
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNo

Genome Summary

Xanthomonas campestris pv. vesicatoria str. 85-10

Accession NumberNC_007505.1

Gene Summary

Adenine Count

3912 bp

Thymine Count

3792 bp

Guanine Count

5603 bp

Cytosine Count

5839 bp

Genome Length

19146 bp

Protein-coding Genes

16848 genes

Non-Coding Genes

2298 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
atpase, t2ss/t4p/t4ss familyIS_RS23955P24559+19046 - 2002635546.8
shufflon system plasmid conjugative transfer pilus tip adhesin pilvIS_RS23960P09748+20023 - 2151051863.9
type iv pilus biogenesis protein pilmIS_RS23560Not Available+21524 - 2196415156.3
hypothetical proteinIS_RS00460Not Available+22121 - 2247113388.7
hypothetical proteinIS_RS00465Not Available+22586 - 2309519741.6
hypothetical proteinIS_RS23965Not Available-23205 - 2372319568.5
transposaseIS_RS00470Not Available-23755 - 2430621499.3
is5-like element is1646 family transposaseIS_RS00475Not Available+24444 - 2542436732.4
is3-like element is1404 family transposaseIS_RS00480P24577-25939 - 2704142455.5
is3 family transposaseIS_RS00495P16940-27503 - 2865944358.0

Displaying genes 41 – 50 of 207 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites