Xanthomonas campestris pv. vesicatoria str. 85-10

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Description

The Xanthomonadaceae are a family of Gram negative bacteria belonging to the order Xanthomonadales in the gammaproteobacteria. They are typically characterized as environmental organisms and are found in soil and water, as well as plant tissues. Many Xanthomonadaceae, especially species from the genera Xanthomonas and Xylella, cause plant diseases. Only one, Stenotrophomonas maltophilia, has isolates known to be opportunistic human pathogens.Xanthomonas campestris pv. campestris causes black rot, which affects crucifers such as Brassica and Arabidopsis. Symptoms include marginal leaf chlorosis and darkening of vascular tissue, accompanied by extensive wilting and necrosis. This bacterium is grown commercially to produce the exopolysaccharide xanthan gum, which is used to control viscosity and as a stabilizing agent in many industries. (HAMAP: XANCP)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXanthomonas
SpeciesXanthomonas euvesicatoria
StrainOct-85

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Xanthomonas campestris pv. vesicatoria str. 85-10
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNo

Genome Summary

Xanthomonas campestris pv. vesicatoria str. 85-10

Accession NumberNC_007505.1

Gene Summary

Adenine Count

3912 bp

Thymine Count

3792 bp

Guanine Count

5603 bp

Cytosine Count

5839 bp

Genome Length

19146 bp

Protein-coding Genes

16848 genes

Non-Coding Genes

2298 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
zeta toxin family proteinIS_RS00900Not Available-109947 - 11113445703.6
hypothetical proteinIS_RS00905Not Available-111141 - 1114049660.49
type ii toxin-antitoxin system vapc family toxinIS_RS00910Not Available-111429 - 11183014627.9
antitoxinIS_RS00915Not Available-111827 - 1120879803.49
recombinase family proteinIS_RS00920P10311+112277 - 11284320076.1
avrbs1/avra family type iii secretion system effectorIS_RS24000P19520-113115 - 11444349503.1
type iii secretion system effector xophIS_RS26465P0A0W0-114543 - 11561339911.0
hypothetical proteinIS_RS00925Not Available-115889 - 11618511387.5
is3 family transposaseIS_RS00935P17985+116655 - 11771241104.4
recombinase family proteinIS_RS00940P03015-117717 - 11864034152.7

Displaying genes 131 – 140 of 207 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites