Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Salipiger
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Salipiger |
| Species | Salipiger bermudensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Salipiger bermudensis HTCC2601
Accession NumberAATQ00000000.1
Gene Summary
Adenine Count
909881 bp
Thymine Count
911003 bp
Guanine Count
1802446 bp
Cytosine Count
1802590 bp
Genome Length
5425920 bp
Protein-coding Genes
5399 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protocatechuate 3,4-dioxygenase beta subunit | R2601_13129 | Not Available | - | 5307065 - 5307790 | 27192.1 |
| 4-carboxymuconolactone decarboxylase | R2601_13134 | Not Available | - | 5307787 - 5308173 | 14143.7 |
| 3-oxoadipate enol-lactone hydrolase | R2601_13139 | Not Available | - | 5308166 - 5308954 | 28068.0 |
| pca operon transcriptional activator pcaq | R2601_13144 | Not Available | + | 5309140 - 5309664 | 19881.3 |
| hypothetical protein | R2601_19472 | Not Available | + | 5309665 - 5310909 | 42200.7 |
| Trna-leu | Not Available | Not Available | + | 5311065 - 5311151 | Not Available |
| hypothetical protein | R2601_19477 | Not Available | - | 5311558 - 5313351 | 62266.3 |
| hypothetical protein | R2601_19482 | Not Available | + | 5313463 - 5313933 | 16405.3 |
| hypothetical protein | R2601_19487 | Not Available | - | 5313956 - 5314984 | 37929.6 |
| metallopeptidase, family m24 | R2601_19492 | Not Available | - | 5315158 - 5316300 | 41389.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.