Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprocola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola coprocola
Accession NumberQRUU00000000.1
Gene Summary
Adenine Count
1061591 bp
Thymine Count
1041659 bp
Guanine Count
719618 bp
Cytosine Count
730676 bp
Genome Length
3553784 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| xre family transcriptional regulator | DWY20_01255 | Not Available | + | 301447 - 301662 | 8214.1 |
| aaa family atpase | DWY20_01260 | Not Available | + | 301659 - 303263 | 59241.4 |
| giy-yig nuclease family protein | DWY20_01265 | Not Available | + | 303384 - 304013 | 24144.9 |
| Trna-met | Not Available | Not Available | + | 304246 - 304322 | Not Available |
| calcium-translocating p-type atpase, pmca-type | DWY20_01275 | Not Available | + | 304482 - 307109 | 96519.9 |
| had family phosphatase | DWY20_01280 | Not Available | + | 307137 - 307751 | 23444.8 |
| bifunctional riboflavin kinase/fad synthetase | DWY20_01285 | Not Available | + | 307760 - 308686 | 35493.0 |
| glycoside hydrolase family 97 protein | DWY20_01290 | Not Available | - | 308774 - 310882 | 79731.2 |
| duf3836 domain-containing protein | DWY20_01295 | Not Available | + | 311079 - 311519 | 16988.2 |
| cpbp family intramembrane metalloprotease | DWY20_01300 | Not Available | + | 311536 - 312351 | 30191.6 |
Pathways
173 pathways
Fatty Acid Oxidation (Octanoate)
Fatty Acid Oxidation (Octanoate)
Fatty Acid Oxidation (Butanoate)
Fatty Acid Oxidation (Butanoate)
Fatty Acid Oxidation
Fatty Acid Oxidation
Fatty Acid Oxidation (Myristate)
Fatty Acid Oxidation (Myristate)
Fatty Acid Oxidation (Steareate)
Fatty Acid Oxidation (Steareate)
Fatty Acid Oxidation (Laurate)
Fatty Acid Oxidation (Laurate)
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism

