Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprocola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola coprocola
Accession NumberQRUU00000000.1
Gene Summary
Adenine Count
1061591 bp
Thymine Count
1041659 bp
Guanine Count
719618 bp
Cytosine Count
730676 bp
Genome Length
3553784 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alpha-glucan family phosphorylase | DWY20_13025 | Not Available | + | 3138705 - 3141272 | 98631.5 |
| hypothetical protein | DWY20_13030 | Not Available | + | 3141398 - 3142135 | 28040.8 |
| pts sugar transporter subunit iic | DWY20_13035 | Not Available | - | 3142244 - 3142590 | 11900.2 |
| glycosyl hydrolase family 88 | DWY20_13040 | Not Available | + | 3142852 - 3144951 | 80355.3 |
| tonb-dependent receptor | DWY20_13045 | Not Available | + | 3145057 - 3148305 | 118863.0 |
| ragb/susd family nutrient uptake outer membrane protein | DWY20_13050 | Not Available | + | 3148326 - 3150281 | 72654.0 |
| duf5123 domain-containing protein | DWY20_13055 | Not Available | + | 3150309 - 3151949 | 58891.7 |
| pectate lyase | DWY20_13060 | Not Available | + | 3152088 - 3153620 | 55891.9 |
| pectate lyase | DWY20_13065 | Not Available | + | 3153631 - 3155109 | 54122.2 |
| trmh family rna methyltransferase | DWY20_13070 | Not Available | - | 3155441 - 3155974 | 19963.3 |
Pathways
173 pathways
Fatty Acid Oxidation (Octanoate)
Fatty Acid Oxidation (Octanoate)
Fatty Acid Oxidation (Butanoate)
Fatty Acid Oxidation (Butanoate)
Fatty Acid Oxidation
Fatty Acid Oxidation
Fatty Acid Oxidation (Myristate)
Fatty Acid Oxidation (Myristate)
Fatty Acid Oxidation (Steareate)
Fatty Acid Oxidation (Steareate)
Fatty Acid Oxidation (Laurate)
Fatty Acid Oxidation (Laurate)
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism

