Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprocola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola coprocola
Accession NumberQRUU00000000.1
Gene Summary
Adenine Count
1061591 bp
Thymine Count
1041659 bp
Guanine Count
719618 bp
Cytosine Count
730676 bp
Genome Length
3553784 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| [fefe] hydrogenase h-cluster maturation gtpase hydf | DWY20_12280 | Not Available | - | 2956317 - 2957501 | 43772.6 |
| [fefe] hydrogenase h-cluster radical sam maturase hydg | DWY20_12285 | Not Available | - | 2957521 - 2958939 | 53916.3 |
| [fefe] hydrogenase h-cluster radical sam maturase hyde | DWY20_12290 | Not Available | - | 2958972 - 2960006 | 39069.2 |
| 4fe-4s dicluster domain-containing protein | DWY20_12295 | Not Available | - | 2960022 - 2961494 | 54507.7 |
| fha domain-containing protein | DWY20_12300 | Not Available | - | 2961554 - 2962084 | 19969.9 |
| spor domain-containing protein | DWY20_12305 | Not Available | - | 2962103 - 2963230 | 42032.6 |
| is4 family transposase | DWY20_12310 | Not Available | + | 2963752 - 2964921 | 45930.9 |
| hypothetical protein | DWY20_12315 | Not Available | - | 2964975 - 2965529 | 21410.5 |
| phosphoserine phosphatase serb | DWY20_12325 | Not Available | - | 2966806 - 2968041 | 46040.7 |
| hypothetical protein | DWY20_12330 | Not Available | + | 2968323 - 2968817 | 18279.9 |
Pathways
173 pathways
Fatty Acid Oxidation (Octanoate)
Fatty Acid Oxidation (Octanoate)
Fatty Acid Oxidation (Butanoate)
Fatty Acid Oxidation (Butanoate)
Fatty Acid Oxidation
Fatty Acid Oxidation
Fatty Acid Oxidation (Myristate)
Fatty Acid Oxidation (Myristate)
Fatty Acid Oxidation (Steareate)
Fatty Acid Oxidation (Steareate)
Fatty Acid Oxidation (Laurate)
Fatty Acid Oxidation (Laurate)
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism

