Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprocola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola coprocola
Accession NumberQRUU00000000.1
Gene Summary
Adenine Count
1061591 bp
Thymine Count
1041659 bp
Guanine Count
719618 bp
Cytosine Count
730676 bp
Genome Length
3553784 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative transporter | DWY20_05470 | Not Available | - | 1339857 - 1341539 | 60361.1 |
| methylmalonyl-coa mutase small subunit | DWY20_05475 | Not Available | + | 1341721 - 1343589 | 69548.9 |
| methylmalonyl-coa mutase | DWY20_05480 | Not Available | + | 1343594 - 1345741 | 79296.0 |
| n-acetylmuramoyl-l-alanine amidase | DWY20_05485 | Not Available | - | 1346027 - 1346833 | 30574.8 |
| tlpa family protein disulfide reductase | DWY20_05490 | Not Available | - | 1346833 - 1347372 | 20121.7 |
| acyl-coa carboxylase subunit beta | DWY20_05495 | Not Available | - | 1347680 - 1349212 | 55899.0 |
| acetyl-coa carboxylase biotin carboxyl carrier protein subunit | DWY20_05500 | Not Available | - | 1349217 - 1349735 | 19077.9 |
| acetyl-coa carboxylase biotin carboxylase subunit | DWY20_05505 | Not Available | - | 1349747 - 1351258 | 57214.8 |
| do family serine endopeptidase | DWY20_05510 | Not Available | - | 1351550 - 1353046 | 53383.0 |
| yihy/virulence factor brkb family protein | DWY20_05520 | Not Available | + | 1353695 - 1355005 | 50518.0 |
Pathways
173 pathways
Fatty Acid Oxidation (Octanoate)
Fatty Acid Oxidation (Octanoate)
Fatty Acid Oxidation (Butanoate)
Fatty Acid Oxidation (Butanoate)
Fatty Acid Oxidation
Fatty Acid Oxidation
Fatty Acid Oxidation (Myristate)
Fatty Acid Oxidation (Myristate)
Fatty Acid Oxidation (Steareate)
Fatty Acid Oxidation (Steareate)
Fatty Acid Oxidation (Laurate)
Fatty Acid Oxidation (Laurate)
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism

