Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola coprocola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola coprocola
Accession NumberQRUU00000000.1
Gene Summary
Adenine Count
1061591 bp
Thymine Count
1041659 bp
Guanine Count
719618 bp
Cytosine Count
730676 bp
Genome Length
3553784 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ump kinase | DWY20_05420 | Not Available | + | 1328738 - 1329448 | 25567.3 |
| histidine phosphatase family protein | DWY20_05425 | Not Available | - | 1329548 - 1330066 | 19547.6 |
| energy-dependent translational throttle protein etta | DWY20_05430 | Not Available | - | 1330170 - 1331858 | 63969.5 |
| mfs transporter | DWY20_05435 | Not Available | - | 1331870 - 1332997 | 41856.6 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | DWY20_05440 | Not Available | - | 1333026 - 1333847 | 29342.8 |
| had family phosphatase | DWY20_05445 | Not Available | - | 1333903 - 1334553 | 24210.2 |
| mate family efflux transporter | DWY20_05450 | Not Available | + | 1334648 - 1336006 | 49623.7 |
| divalent metal cation transporter | DWY20_05455 | Not Available | - | 1336161 - 1337417 | 45663.7 |
| putative dna modification/repair radical sam protein | DWY20_05460 | Not Available | - | 1337478 - 1338743 | 48224.3 |
| dmt family transporter | DWY20_05465 | Not Available | + | 1338871 - 1339773 | 34479.3 |
Pathways
173 pathways
Fatty Acid Oxidation (Octanoate)
Fatty Acid Oxidation (Octanoate)
Fatty Acid Oxidation (Butanoate)
Fatty Acid Oxidation (Butanoate)
Fatty Acid Oxidation
Fatty Acid Oxidation
Fatty Acid Oxidation (Myristate)
Fatty Acid Oxidation (Myristate)
Fatty Acid Oxidation (Steareate)
Fatty Acid Oxidation (Steareate)
Fatty Acid Oxidation (Laurate)
Fatty Acid Oxidation (Laurate)
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism

