Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius
Accession NumberQSJG00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf4133 domain-containing protein | DXB87_01940 | Not Available | + | 393533 - 393895 | 13864.5 |
| trag family conjugative transposon atpase | DXB87_01945 | Not Available | + | 393892 - 396405 | 96330.6 |
| duf4141 domain-containing protein | DXB87_01950 | Not Available | + | 396417 - 397043 | 23236.0 |
| conjugative transposon protein traj | DXB87_01955 | Not Available | + | 397063 - 398058 | 36778.0 |
| conjugative transposon protein trak | DXB87_01960 | Not Available | + | 398079 - 398702 | 23884.7 |
| duf3989 domain-containing protein | DXB87_01965 | Not Available | + | 398707 - 399003 | 11476.1 |
| conjugative transposon protein tram | DXB87_01970 | Not Available | + | 398981 - 400294 | 47728.6 |
| conjugative transposon protein tran | DXB87_01975 | Not Available | + | 400328 - 401263 | 35297.6 |
| conjugal transfer protein | DXB87_01980 | Not Available | + | 401267 - 401848 | 21795.3 |
| duf3872 domain-containing protein | DXB87_01985 | Not Available | + | 401862 - 402320 | 17562.0 |
Pathways
165 pathways
Fatty Acid Oxidation (Octanoate)
Fatty Acid Oxidation (Octanoate)
Fatty Acid Oxidation (Butanoate)
Fatty Acid Oxidation (Butanoate)
Fatty Acid Oxidation
Fatty Acid Oxidation
Fatty Acid Oxidation (Myristate)
Fatty Acid Oxidation (Myristate)
Fatty Acid Oxidation (Steareate)
Fatty Acid Oxidation (Steareate)
Fatty Acid Oxidation (Laurate)
Fatty Acid Oxidation (Laurate)
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism
