Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain OM06-2 OM06-2.Scaf63, whole genome
Gene Summary
Adenine Count
1073471 bp
Thymine Count
1083807 bp
Guanine Count
870519 bp
Cytosine Count
860999 bp
Genome Length
3889096 bp
Protein-coding Genes
3270 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolase | BHV76_12140 | Not Available | Negative | 2967428 - 2968294 | 33910.9 |
| diphosphate--fructose-6-phosphate 1-phosphotransferase | BHV76_12145 | Not Available | Negative | 2968420 - 2970063 | 59907.0 |
| hypothetical protein | BHV76_12150 | Not Available | Positive | 2970214 - 2970462 | 9206.38 |
| acyltransferase | BHV76_12155 | Not Available | Positive | 2970473 - 2971030 | 21350.4 |
| alpha-1,3-galactosidase b | BHV76_12160 | Not Available | Negative | 2971113 - 2972930 | 68988.8 |
| xanthan lyase | BHV76_12165 | Not Available | Positive | 2973013 - 2975883 | 106920.0 |
| hypothetical protein | BHV76_12170 | Not Available | Positive | 2975974 - 2976291 | 12244.6 |
| ygiq family radical sam protein | BHV76_12175 | Not Available | Positive | 2976343 - 2978232 | 72325.2 |
| sodium-translocating pyrophosphatase | BHV76_12180 | Not Available | Positive | 2978490 - 2980570 | 72873.5 |
| hypothetical protein | BHV76_12185 | Not Available | Negative | 2980715 - 2982493 | 69009.5 |
Pathways
165 pathways
Health Effects
No health effects information available for this bacterium.

