Thermotoga neapolitana DSM 4359

Gram-negativeRodNon-motileMicroaerophilic

Kingdom

Thermotogati

Phylum

Thermotogota

Class

Thermotogae

Order

Thermotogales

Family

Thermotogaceae

Genus

Thermotoga

Description

Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) is a hyperthermophilic bacterium isolated from black smoker in the bay near Naples, Italy. This organism, like other Thermotoga, produces a vast quantity of hydrogen in batch culture. It is being considered for use in projects to utilize waste carboydrates for the production of hydrogen gas for industrial purposes. A number of thermostable enzymes such as alkaline phosphatase are also produced by this bacterium and may be of use for industrial purposes. (adapted from : http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&cmd=ShowDetailView&TermToSearch=21023). (HAMAP: THENN)

Taxonomy

Kingdom	Thermotogati
Phylum	Thermotogota
Class	Thermotogae
Order	Thermotogales
Family	Thermotogaceae
Genus	Thermotoga
Species	Thermotoga neapolitana
Strain	DSM 4359

Profile

Physiology
Gram staining properties	Negative
Shape	Rod
Mobility	No
Flagellar presence	Yes
Number of membranes	2

Ecology, Host, and Life Cycle
Oxygen requirements	Microaerophilic
Optimal temperature	70
Temperature range	Hyperthermophilic
Habitat	Specialized
Biotic relationship	Free living
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Nonsporulating
Energy source	Heterotroph
Pathogenicity	No

Genome Summary

Thermotoga neapolitana DSM 4359

Accession NumberNC_011978.1

Gene Summary

Adenine Count

499409 bp

Thymine Count

500494 bp

Guanine Count

440015 bp

Cytosine Count

444644 bp

Genome Length

1884562 bp

Protein-coding Genes

1907 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

Name	Locus Tag	UniProt	Strand	Coordinates	Molecular Weight
type ii secretion system protein gspd	CTN_RS07260	Not Available	-	1420754 - 1421917	42790.8
hypothetical protein	CTN_RS07265	Not Available	-	1421914 - 1423545	60138.4
hypothetical protein	CTN_RS07270	Not Available	-	1423607 - 1424260	24785.2
hypothetical protein	CTN_RS07275	Not Available	-	1424304 - 1424981	25672.9
hypothetical protein	CTN_RS07280	Not Available	-	1424996 - 1425940	36013.9
cupin domain-containing protein	CTN_RS07285	Not Available	+	1426071 - 1426340	10755.9
Ncrna_class:srp_rna	Not Available	Not Available	+	1426381 - 1426646	Not Available
hypothetical protein	CTN_RS07290	Not Available	+	1426646 - 1427092	16564.1
na(+)/h(+) antiporter subunit b	CTN_RS07295	Not Available	-	1427084 - 1427686	22511.3
na(+)/h(+) antiporter subunit b	CTN_RS07300	Not Available	-	1427683 - 1428351	25982.7

Displaying genes 1471 – 1480 of 1961 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	Structure	CAS number	Average mass Monoisotopic mass
BASm0000251	2-dehydropantoateC6H9O4		Not available	Average145.1333Da Monoisotopic145.050083776Da
BASm0000274	aldehydo-D-galacturonateC6H9O7		Not available	Average193.132Da Monoisotopic193.0353762Da
BASm0000387	(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6		Not available	Average455.432Da Monoisotopic455.1564286Da
BASm0001111	keto-D-tagaturonateC6H9O7		Not available	Average193.132Da Monoisotopic193.0353762Da
BASm0001717	fumarateC4H2O4		Not available	Average114.0563Da Monoisotopic113.9953086Da
BASm0001779	orotateC5H3N2O4		Not available	Average155.09Da Monoisotopic155.0098302Da
BASm0001865	diphosphateHO7P2		Not available	Average174.95Da Monoisotopic174.9213971Da
BASm0002198	beta-D-ribofuranoseC5H10O5		`50-69-1`	Average150.1299Da Monoisotopic150.05282343Da
BASm0002305	(S)-2-ethyl-2-hydroxy-3-oxobutanoateC6H9O4		Not available	Average145.135Da Monoisotopic145.0506324Da
BASm0002307	(2R,3R)-2,3-dihydroxy-3-methylpentanoateC6H11O4		Not available	Average147.1491Da Monoisotopic147.06573384Da

Displaying 1–10 of 49 metabolites