Thermomicrobium roseum DSM 5159 str. DSM5159

Gram-negativeRodNon-motileAerobe

Kingdom

Pseudomonadati

Phylum

Thermomicrobiota

Class

Thermomicrobia

Order

Thermomicrobiales

Family

Thermomicrobiaceae

Genus

Thermomicrobium

Description

Thermomicrobium roseum DSM 5159 str. DSM5159 is a Gram-negative, rod-shaped bacterium characterized by its unique cellular arrangement, which occurs predominantly in pairs or as single cells. This microbe thrives optimally at a temperature of 70.0°C, indicating its preference for thermophilic environments. As an aerobe, Thermomicrobium roseum requires oxygen for its metabolic processes, aligning it with other organisms adapted to high-temperature habitats where oxygen is available. The specific habitat of Thermomicrobium roseum is described as specialized, suggesting that it occupies a niche that may be distinct from more common microbial environments. This specialization may confer advantages in terms of competition and survival in extreme conditions, potentially influencing biogeochemical cycles in its ecosystem. Understanding the traits of Thermomicrobium roseum provides insight into the adaptations required for life in high-temperature, oxygen-rich environments. Its unique metabolic requirements and thermal tolerance may play a vital role in the microbial community structure and function in geothermal ecosystems, highlighting the importance of thermophilic microbes in nutrient cycling and energy flow in extreme habitats.

Taxonomy

KingdomPseudomonadati
PhylumThermomicrobiota
ClassThermomicrobia
OrderThermomicrobiales
FamilyThermomicrobiaceae
GenusThermomicrobium
SpeciesThermomicrobium roseum
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Thermomicrobium roseum DSM 5159 str. DSM5159
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature70
Temperature rangeThermophilic
HabitatSpecialized
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thermomicrobium roseum DSM 5159 str. DSM5159

Accession NumberNC_011959.1

Gene Summary

Adenine Count

363451 bp

Thymine Count

364699 bp

Guanine Count

638868 bp

Cytosine Count

635986 bp

Genome Length

2003006 bp

Protein-coding Genes

1765 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
sdr family oxidoreductaseTRD_RS13355G9FRD7+911872 - 91273530792.9
cupin domain-containing proteinTRD_RS13360Not Available+912687 - 91318718850.3
voc family proteinTRD_RS13365Not Available+913237 - 91413633283.5
3,4-dihydroxyphenylacetate 2,3-dioxygenaseTRD_RS13370Q8GR45+914189 - 91515437094.8
aaa family atpaseTRD_RS13375Not Available-915217 - 91742781515.5

Displaying genes 2621 – 2625 of 2625 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

170 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000609D-xylono-1,4-lactoneC5H8O5Chemical structure of D-xylono-1,4-lactoneNot available
Average148.114Da
Monoisotopic148.0371734Da
BASm0000645L-arabinonateC5H9O6Chemical structure of L-arabinonateNot available
Average165.122Da
Monoisotopic165.0404616Da
BASm0000686vanillateC8H7O4Chemical structure of vanillateNot available
Average167.1388Da
Monoisotopic167.0344337Da
BASm00007052-dehydro-3-deoxy-D-arabinonateC5H7O5Chemical structure of 2-dehydro-3-deoxy-D-arabinonateNot available
Average147.107Da
Monoisotopic147.0298969Da

Displaying 1–10 of 170 metabolites