Kingdom
Pseudomonadati
Phylum
Campylobacterota
Class
Epsilonproteobacteria
Order
Campylobacterales
Family
Campylobacteraceae
Genus
Campylobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Campylobacterota |
| Class | Epsilonproteobacteria |
| Order | Campylobacterales |
| Family | Campylobacteraceae |
| Genus | Campylobacter |
| Species | Campylobacter lari |
| Strain | RM2100 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Microaerophilic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Chains - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Genome Summary
Campylobacter lari RM2100
Accession NumberNC_012040.1
Gene Summary
Adenine Count
17262 bp
Thymine Count
16528 bp
Guanine Count
6516 bp
Cytosine Count
5895 bp
Genome Length
46201 bp
Protein-coding Genes
44 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| udp-3-o-acyl-n-acetylglucosamine deacetylase | CLA_RS01090 | Not Available | + | 193803 - 194687 | 32690.6 |
| glycoprotease | CLA_RS01095 | Not Available | + | 194729 - 195136 | 15184.5 |
| homoserine kinase | CLA_RS01100 | Not Available | + | 195145 - 196023 | 32665.7 |
| duf448 domain-containing protein | CLA_RS01105 | Not Available | + | 196048 - 196314 | 10434.8 |
| translation initiation factor if-2 | CLA_RS01110 | Not Available | + | 196295 - 198928 | 96561.9 |
| 30s ribosome-binding factor rbfa | CLA_RS01115 | Not Available | + | 198925 - 199287 | 14332.2 |
| ribosome maturation factor rimp | CLA_RS01120 | Not Available | + | 199277 - 199699 | 15970.1 |
| pdc sensor domain-containing protein | CLA_RS08570 | Not Available | + | 200037 - 200447 | 15788.1 |
| bspa family leucine-rich repeat surface protein | CLA_RS08100 | Not Available | - | 200377 - 200850 | 18830.7 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | CLA_RS01135 | Not Available | + | 201140 - 202132 | 37020.9 |
Pathways
9 pathways
Cyanate Degradation
Cyanate Degradation
Nitrogen Metabolism
Nitrogen Metabolism
Ornithine Metabolism
Ornithine Metabolism
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Galactose Degradation/Leloir Pathway
Galactose Degradation/Leloir Pathway
Amino Sugar and Nucleotide Sugar Metabolism I
Amino Sugar and Nucleotide Sugar Metabolism I
Amino Sugar and Nucleotide Sugar Metabolism II
Amino Sugar and Nucleotide Sugar Metabolism II
PRPP Biosynthesis
PRPP Biosynthesis


