Kingdom
Pseudomonadati
Phylum
Campylobacterota
Class
Epsilonproteobacteria
Order
Campylobacterales
Family
Campylobacteraceae
Genus
Campylobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Campylobacterota |
| Class | Epsilonproteobacteria |
| Order | Campylobacterales |
| Family | Campylobacteraceae |
| Genus | Campylobacter |
| Species | Campylobacter lari |
| Strain | RM2100 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Microaerophilic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Chains - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Genome Summary
Campylobacter lari RM2100
Accession NumberNC_012040.1
Gene Summary
Adenine Count
17262 bp
Thymine Count
16528 bp
Guanine Count
6516 bp
Cytosine Count
5895 bp
Genome Length
46201 bp
Protein-coding Genes
44 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type iv secretion system protein | CLA_RS07940 | Not Available | + | 17607 - 18617 | 36493.1 |
| hypothetical protein | CLA_RS07945 | Not Available | + | 18607 - 19068 | 18080.8 |
| virb8 family protein | CLA_RS07950 | Not Available | + | 19299 - 19967 | 25309.4 |
| p-type conjugative transfer protein virb9 | CLA_RS07955 | Not Available | + | 19964 - 20899 | 35817.9 |
| type iv secretion system protein virb10 | CLA_RS07960 | Not Available | + | 20896 - 22071 | 43232.3 |
| p-type dna transfer atpase virb11 | CLA_RS07965 | Not Available | + | 22071 - 23072 | 38023.7 |
| hypothetical protein | CLA_RS07970 | Not Available | + | 23062 - 23637 | 22349.5 |
| type iv secretory system conjugative dna transfer family protein | CLA_RS07975 | Not Available | + | 23627 - 25423 | 68308.9 |
| cag pathogenicity island cag12 family protein | CLA_RS07980 | Not Available | + | 25407 - 25844 | 16516.3 |
| hypothetical protein | CLA_RS08505 | Not Available | + | 25837 - 25968 | 5075.25 |
Pathways
9 pathways
Cyanate Degradation
Cyanate Degradation
Nitrogen Metabolism
Nitrogen Metabolism
Ornithine Metabolism
Ornithine Metabolism
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Galactose Degradation/Leloir Pathway
Galactose Degradation/Leloir Pathway
Amino Sugar and Nucleotide Sugar Metabolism I
Amino Sugar and Nucleotide Sugar Metabolism I
Amino Sugar and Nucleotide Sugar Metabolism II
Amino Sugar and Nucleotide Sugar Metabolism II
PRPP Biosynthesis
PRPP Biosynthesis


