Kingdom
Pseudomonadati
Phylum
Campylobacterota
Class
Epsilonproteobacteria
Order
Campylobacterales
Family
Campylobacteraceae
Genus
Campylobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Campylobacterota |
| Class | Epsilonproteobacteria |
| Order | Campylobacterales |
| Family | Campylobacteraceae |
| Genus | Campylobacter |
| Species | Campylobacter lari |
| Strain | RM2100 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Microaerophilic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Chains - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Genome Summary
Campylobacter lari RM2100
Accession NumberNC_012040.1
Gene Summary
Adenine Count
17262 bp
Thymine Count
16528 bp
Guanine Count
6516 bp
Cytosine Count
5895 bp
Genome Length
46201 bp
Protein-coding Genes
44 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | CLA_RS07780 | Not Available | + | 1510587 - 1511684 | 39976.0 |
| efflux rnd transporter permease subunit | CLA_RS07785 | Not Available | + | 1511684 - 1514806 | 113552.0 |
| efflux transporter outer membrane subunit | CLA_RS07790 | Not Available | + | 1514799 - 1516241 | 54667.9 |
| mini-momp protein | CLA_RS07795 | Not Available | - | 1516258 - 1516449 | 7365.85 |
| coproporphyrinogen iii oxidase family protein | CLA_RS07800 | Not Available | + | 1516527 - 1517858 | 51605.3 |
| class i sam-dependent methyltransferase | CLA_RS07805 | Not Available | + | 1517919 - 1518593 | 26277.0 |
| protoporphyrinogen oxidase hemj | CLA_RS07810 | Not Available | - | 1518614 - 1519063 | 17789.3 |
| signal peptidase ii | CLA_RS07815 | Not Available | - | 1519044 - 1519511 | 18334.0 |
| phosphoglucosamine mutase | CLA_RS07820 | Not Available | - | 1519504 - 1520841 | 48929.5 |
| duf945 family protein | CLA_RS07825 | Not Available | + | 1520973 - 1522148 | 44267.1 |
Pathways
9 pathways
Cyanate Degradation
Cyanate Degradation
Nitrogen Metabolism
Nitrogen Metabolism
Ornithine Metabolism
Ornithine Metabolism
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Galactose Degradation/Leloir Pathway
Galactose Degradation/Leloir Pathway
Amino Sugar and Nucleotide Sugar Metabolism I
Amino Sugar and Nucleotide Sugar Metabolism I
Amino Sugar and Nucleotide Sugar Metabolism II
Amino Sugar and Nucleotide Sugar Metabolism II
PRPP Biosynthesis
PRPP Biosynthesis


