Kingdom
Pseudomonadati
Phylum
Campylobacterota
Class
Epsilonproteobacteria
Order
Campylobacterales
Family
Campylobacteraceae
Genus
Campylobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Campylobacterota |
| Class | Epsilonproteobacteria |
| Order | Campylobacterales |
| Family | Campylobacteraceae |
| Genus | Campylobacter |
| Species | Campylobacter lari |
| Strain | RM2100 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Microaerophilic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Chains - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Genome Summary
Campylobacter lari RM2100
Accession NumberNC_012040.1
Gene Summary
Adenine Count
17262 bp
Thymine Count
16528 bp
Guanine Count
6516 bp
Cytosine Count
5895 bp
Genome Length
46201 bp
Protein-coding Genes
44 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| recombination protein reco | CLA_RS01040 | Not Available | + | 184627 - 185241 | 24704.9 |
| hypothetical protein | CLA_RS01045 | Not Available | - | 185225 - 185545 | 11904.4 |
| trna dihydrouridine synthase | CLA_RS01050 | Not Available | - | 185607 - 186533 | 34864.4 |
| hypothetical protein | CLA_RS01055 | Not Available | - | 186530 - 187513 | 38751.6 |
| rna polymerase-binding protein dksa | CLA_RS01060 | Not Available | - | 187510 - 187866 | 14072.5 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | CLA_RS01065 | Not Available | - | 187875 - 188330 | 17538.1 |
| acetyl-coa carboxylase, carboxyltransferase subunit beta | CLA_RS01070 | Not Available | - | 188333 - 189175 | 31131.8 |
| outer membrane protein assembly factor bama | CLA_RS01075 | Not Available | - | 189226 - 191442 | 82833.0 |
| prephenate dehydrogenase | CLA_RS01080 | Not Available | + | 191521 - 192348 | 30978.1 |
| m23 family metallopeptidase | CLA_RS01085 | Not Available | + | 192421 - 193800 | 52441.8 |
Pathways
9 pathways
Cyanate Degradation
Cyanate Degradation
Nitrogen Metabolism
Nitrogen Metabolism
Ornithine Metabolism
Ornithine Metabolism
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Galactose Degradation/Leloir Pathway
Galactose Degradation/Leloir Pathway
Amino Sugar and Nucleotide Sugar Metabolism I
Amino Sugar and Nucleotide Sugar Metabolism I
Amino Sugar and Nucleotide Sugar Metabolism II
Amino Sugar and Nucleotide Sugar Metabolism II
PRPP Biosynthesis
PRPP Biosynthesis


