Kingdom
Pseudomonadati
Phylum
Campylobacterota
Class
Epsilonproteobacteria
Order
Campylobacterales
Family
Campylobacteraceae
Genus
Campylobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Campylobacterota |
| Class | Epsilonproteobacteria |
| Order | Campylobacterales |
| Family | Campylobacteraceae |
| Genus | Campylobacter |
| Species | Campylobacter lari |
| Strain | RM2100 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Microaerophilic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Chains - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Genome Summary
Campylobacter lari RM2100
Accession NumberNC_012040.1
Gene Summary
Adenine Count
17262 bp
Thymine Count
16528 bp
Guanine Count
6516 bp
Cytosine Count
5895 bp
Genome Length
46201 bp
Protein-coding Genes
44 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fad-dependent thymidylate synthase | CLA_RS00060 | Not Available | - | 9895 - 10527 | 24300.8 |
| ctp synthase | CLA_RS00065 | Not Available | + | 10627 - 12264 | 60678.5 |
| single-stranded-dna-specific exonuclease recj | CLA_RS00070 | Not Available | + | 12254 - 13825 | 59590.3 |
| lytic transglycosylase domain-containing protein | CLA_RS08085 | Not Available | + | 13894 - 14472 | 22280.3 |
| peptide chain release factor 1 | CLA_RS00080 | Not Available | - | 14482 - 15549 | 40013.7 |
| 30s ribosomal protein s20 | CLA_RS00085 | Not Available | - | 15553 - 15816 | 9874.1 |
| hypothetical protein | CLA_RS08275 | Not Available | - | 15901 - 16041 | 5300.7 |
| pseudouridine synthase | CLA_RS00090 | Not Available | - | 16105 - 16866 | 29090.3 |
| ribonuclease j | CLA_RS00095 | Not Available | - | 16876 - 18834 | 74153.5 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | CLA_RS00100 | Not Available | - | 18800 - 19621 | 31315.9 |
Pathways
9 pathways
Cyanate Degradation
Cyanate Degradation
Nitrogen Metabolism
Nitrogen Metabolism
Ornithine Metabolism
Ornithine Metabolism
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Galactose Degradation/Leloir Pathway
Galactose Degradation/Leloir Pathway
Amino Sugar and Nucleotide Sugar Metabolism I
Amino Sugar and Nucleotide Sugar Metabolism I
Amino Sugar and Nucleotide Sugar Metabolism II
Amino Sugar and Nucleotide Sugar Metabolism II
PRPP Biosynthesis
PRPP Biosynthesis


