Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium profundum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Photobacterium profundum SS9
Accession NumberNC_005871.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type i-e crispr-associated protein cas7/cse4/casc | PBPR_RS28860 | Not Available | - | 46753 - 47778 | 37745.0 |
| type i-e crispr-associated protein cse2/casb | PBPR_RS28865 | Not Available | - | 47819 - 48235 | 15867.1 |
| type i-e crispr-associated protein cas6/cse3/case | PBPR_RS28870 | Not Available | - | 48251 - 48796 | 20420.8 |
| crispr-associated helicase/endonuclease cas3 | PBPR_RS28875 | Not Available | - | 48841 - 51273 | 91205.3 |
| nyn domain-containing protein | PBPR_RS28880 | Not Available | - | 51938 - 52843 | 34748.5 |
| hypothetical protein | PBPR_RS28885 | Not Available | + | 53602 - 53829 | 8519.4 |
| atp-dependent nuclease | PBPR_RS28890 | Not Available | + | 54037 - 56025 | 74641.6 |
| uvrd-helicase domain-containing protein | PBPR_RS28895 | Not Available | + | 56032 - 57750 | 65136.1 |
| hypothetical protein | PBPR_RS28900 | Not Available | - | 57943 - 58203 | 9607.9 |
| hypothetical protein | PBPR_RS31020 | Not Available | - | 58725 - 58982 | 9504.72 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.