Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium profundum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Photobacterium profundum SS9
Accession NumberNC_005871.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| oxygen-dependent coproporphyrinogen oxidase | PBPR_RS18110 | Not Available | - | 4039734 - 4040639 | 34738.5 |
| l-threonylcarbamoyladenylate synthase | PBPR_RS18115 | Not Available | - | 4040665 - 4041222 | 20175.2 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | PBPR_RS18120 | Not Available | - | 4041303 - 4041809 | 16852.6 |
| type i dna topoisomerase | PBPR_RS18125 | Not Available | - | 4041887 - 4042444 | 20808.9 |
| duf494 family protein | PBPR_RS18130 | Not Available | - | 4042481 - 4042954 | 18322.9 |
| dna-processing protein dpra | PBPR_RS18135 | Not Available | - | 4042957 - 4044054 | 39351.5 |
| lysm peptidoglycan-binding domain-containing protein | PBPR_RS18140 | Not Available | - | 4044051 - 4045109 | 39633.8 |
| peptide deformylase | PBPR_RS18145 | Not Available | + | 4045463 - 4045972 | 19099.0 |
| methionyl-trna formyltransferase | PBPR_RS18150 | Not Available | + | 4045989 - 4046933 | 34126.2 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase rsmb | PBPR_RS18155 | Not Available | + | 4047004 - 4048299 | 48057.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.