Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis sp. 113P3 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingopyxis sp. 113P3
Accession NumberNZ_CP009452.1
Gene Summary
Adenine Count
792758 bp
Thymine Count
796672 bp
Guanine Count
1421511 bp
Cytosine Count
1409835 bp
Genome Length
4420776 bp
Protein-coding Genes
4174 genes
Non-Coding Genes
132 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transcription termination factor rho | LH20_RS20610 | Not Available | - | 4260759 - 4262015 | 46530.9 |
| copd family protein | LH20_RS20615 | Not Available | - | 4262208 - 4262645 | 16697.2 |
| uroporphyrinogen decarboxylase | LH20_RS20620 | Not Available | - | 4262661 - 4263689 | 36360.8 |
| pyruvate, water dikinase regulatory protein | LH20_RS20625 | Not Available | + | 4264029 - 4264841 | 29915.9 |
| nucleoside triphosphate pyrophosphatase | LH20_RS20630 | Not Available | + | 4264838 - 4265437 | 21422.7 |
| shikimate dehydrogenase | LH20_RS20635 | Not Available | + | 4265434 - 4266249 | 28042.8 |
| dephospho-coa kinase | LH20_RS20640 | Not Available | + | 4266246 - 4266869 | 22837.2 |
| dna polymerase iii subunit epsilon | LH20_RS20645 | Not Available | + | 4266889 - 4267590 | 25689.8 |
| ribosome hibernation-promoting factor, hpf/yfia family | LH20_RS20650 | Not Available | + | 4267638 - 4268210 | 20874.6 |
| pts sugar transporter subunit iia | LH20_RS20655 | Not Available | + | 4268363 - 4268827 | 16333.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.