Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis sp. 113P3 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingopyxis sp. 113P3
Accession NumberNZ_CP009452.1
Gene Summary
Adenine Count
792758 bp
Thymine Count
796672 bp
Guanine Count
1421511 bp
Cytosine Count
1409835 bp
Genome Length
4420776 bp
Protein-coding Genes
4174 genes
Non-Coding Genes
132 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| p-type conjugative transfer protein trbg | LH20_RS20215 | Not Available | - | 4188272 - 4189288 | 36208.0 |
| conjugal transfer protein trbf | LH20_RS20220 | Not Available | - | 4189285 - 4189968 | 25281.9 |
| p-type conjugative transfer protein trbl | LH20_RS20225 | Not Available | - | 4189975 - 4191282 | 43168.5 |
| putative entry exclusion protein trbk-alt | LH20_RS20230 | Not Available | - | 4191284 - 4191586 | 10647.8 |
| p-type conjugative transfer protein trbj | LH20_RS20235 | Not Available | - | 4191592 - 4192350 | 27278.1 |
| conjugal transfer protein trbe | LH20_RS20240 | Not Available | - | 4192347 - 4194782 | 89129.0 |
| virb3 family type iv secretion system protein | LH20_RS20245 | Not Available | - | 4194779 - 4195060 | 10000.4 |
| trbc/virb2 family protein | LH20_RS20250 | Not Available | - | 4195057 - 4195392 | 11393.1 |
| p-type conjugative transfer atpase trbb | LH20_RS20255 | Not Available | - | 4195389 - 4196375 | 34706.1 |
| copg family transcriptional regulator | LH20_RS20260 | Not Available | - | 4196547 - 4196972 | 15892.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.