Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis sp. 113P3 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingopyxis sp. 113P3
Accession NumberNZ_CP009452.1
Gene Summary
Adenine Count
792758 bp
Thymine Count
796672 bp
Guanine Count
1421511 bp
Cytosine Count
1409835 bp
Genome Length
4420776 bp
Protein-coding Genes
4174 genes
Non-Coding Genes
132 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| p-type conjugative transfer atpase trbb | LH20_RS05540 | Not Available | + | 1157138 - 1158124 | 34682.1 |
| trbc/virb2 family protein | LH20_RS05545 | Not Available | + | 1158121 - 1158468 | 12254.1 |
| virb3 family type iv secretion system protein | LH20_RS05550 | Not Available | + | 1158468 - 1158737 | 9650.94 |
| conjugal transfer protein trbe | LH20_RS05555 | Not Available | + | 1158734 - 1161181 | 89467.6 |
| p-type conjugative transfer protein trbj | LH20_RS05560 | Not Available | + | 1161190 - 1161888 | 24360.8 |
| p-type conjugative transfer protein trbl | LH20_RS05570 | Not Available | + | 1162072 - 1163358 | 42907.1 |
| conjugal transfer protein trbf | LH20_RS05575 | Not Available | + | 1163362 - 1164045 | 25512.1 |
| p-type conjugative transfer protein trbg | LH20_RS05580 | Not Available | + | 1164042 - 1164881 | 30419.3 |
| trbi/virb10 family protein | LH20_RS05585 | Not Available | + | 1164989 - 1166083 | 37995.9 |
| isas1 family transposase | LH20_RS05590 | Not Available | + | 1166439 - 1167575 | 43536.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.