Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis sp. 113P3 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingopyxis sp. 113P3
Accession NumberNZ_CP009452.1
Gene Summary
Adenine Count
792758 bp
Thymine Count
796672 bp
Guanine Count
1421511 bp
Cytosine Count
1409835 bp
Genome Length
4420776 bp
Protein-coding Genes
4174 genes
Non-Coding Genes
132 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative entry exclusion protein trbk-alt | LH20_RS05295 | Not Available | - | 1109154 - 1109531 | 12933.3 |
| p-type conjugative transfer protein trbj | LH20_RS05300 | Not Available | - | 1109542 - 1110303 | 27249.2 |
| conjugal transfer protein trbe | LH20_RS05305 | Not Available | - | 1110300 - 1112738 | 89124.3 |
| virb3 family type iv secretion system protein | LH20_RS05310 | Not Available | - | 1112753 - 1113025 | 9443.88 |
| trbc/virb2 family protein | LH20_RS05315 | Not Available | - | 1113025 - 1113357 | 11480.2 |
| p-type conjugative transfer atpase trbb | LH20_RS05320 | Not Available | - | 1113354 - 1114385 | 35756.1 |
| copg family transcriptional regulator | LH20_RS05325 | Not Available | - | 1114553 - 1114990 | 16257.5 |
| conjugal transfer protein trag | LH20_RS05330 | Not Available | - | 1115002 - 1116993 | 72662.1 |
| relaxase/mobilization nuclease domain-containing protein | LH20_RS05335 | Not Available | - | 1117172 - 1119208 | 74862.5 |
| lytic transglycosylase domain-containing protein | LH20_RS05340 | Not Available | - | 1119501 - 1120217 | 24956.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.