Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria sp. TM1040 |
| Strain | TM1040 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Pfiesteria piscicida |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria sp. TM1040
Accession NumberNC_008043.1
Gene Summary
Adenine Count
167632 bp
Thymine Count
166322 bp
Guanine Count
242456 bp
Cytosine Count
245378 bp
Genome Length
821788 bp
Protein-coding Genes
731 genes
Non-Coding Genes
27 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| choice-of-anchor d domain-containing protein | TM1040_RS01845 | Not Available | - | 286135 - 291822 | 188034.0 |
| phage tail protein | TM1040_RS01850 | Not Available | + | 292367 - 292873 | 17685.9 |
| phage tail protein | TM1040_RS01855 | Not Available | + | 292891 - 293409 | 18211.8 |
| phage tail protein | TM1040_RS01860 | Not Available | + | 293419 - 293946 | 18391.5 |
| hypothetical protein | TM1040_RS01865 | Not Available | + | 294016 - 295233 | 43773.8 |
| gnat family n-acetyltransferase | TM1040_RS01870 | Not Available | + | 295230 - 295811 | 22195.5 |
| duf6916 family protein | TM1040_RS01875 | Not Available | - | 295787 - 296080 | 10786.7 |
| hypothetical protein | TM1040_RS01880 | Not Available | - | 296382 - 297275 | 32426.2 |
| glxa family transcriptional regulator | TM1040_RS01885 | Not Available | - | 297512 - 298483 | 35512.4 |
| acetoacetate--coa ligase | TM1040_RS01890 | Not Available | + | 298612 - 300558 | 70912.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.