Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria sp. TM1040 |
| Strain | TM1040 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Pfiesteria piscicida |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria sp. TM1040
Accession NumberNC_008043.1
Gene Summary
Adenine Count
167632 bp
Thymine Count
166322 bp
Guanine Count
242456 bp
Cytosine Count
245378 bp
Genome Length
821788 bp
Protein-coding Genes
731 genes
Non-Coding Genes
27 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tigr02186 family protein | TM1040_RS00880 | Not Available | + | 68621 - 69388 | 27794.5 |
| sdr family oxidoreductase | TM1040_RS00885 | Not Available | - | 69504 - 70241 | 25945.4 |
| aaa family atpase | TM1040_RS00890 | Not Available | - | 70238 - 71791 | 56906.1 |
| helix-turn-helix transcriptional regulator | TM1040_RS00895 | Not Available | - | 71833 - 72552 | 26786.8 |
| hypothetical protein | TM1040_RS00900 | Not Available | + | 72590 - 73012 | 16174.0 |
| crotonyl-coa carboxylase/reductase | TM1040_RS00905 | Not Available | - | 73015 - 74295 | 47260.4 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | TM1040_RS00910 | Not Available | - | 74421 - 75851 | 53233.2 |
| protein meaa | TM1040_RS00915 | Not Available | + | 76029 - 78014 | 72200.1 |
| h-ns family nucleoid-associated regulatory protein | TM1040_RS00920 | Not Available | + | 78144 - 78464 | 11818.9 |
| purine-nucleoside phosphorylase | TM1040_RS00925 | Not Available | + | 78483 - 79187 | 25586.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.