Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria sp. TM1040 |
| Strain | TM1040 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Pfiesteria piscicida |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria sp. TM1040
Accession NumberNC_008043.1
Gene Summary
Adenine Count
167632 bp
Thymine Count
166322 bp
Guanine Count
242456 bp
Cytosine Count
245378 bp
Genome Length
821788 bp
Protein-coding Genes
731 genes
Non-Coding Genes
27 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Gp47 | TM1040_RS08200 | Not Available | - | 835670 - 836443 | 28478.5 |
| Duf1364 containing protein | TM1040_RS08205 | Not Available | - | 836465 - 836842 | 13639.6 |
| Hypothetical protein | TM1040_RS08210 | Not Available | - | 836839 - 837342 | 18442.9 |
| Endonuclease | TM1040_RS08215 | Not Available | - | 837342 - 837950 | 22489.7 |
| Putative erf family protein | TM1040_RS08220 | Not Available | - | 837950 - 838672 | 25900.7 |
| hypothetical protein | TM1040_RS08225 | Not Available | - | 838781 - 839026 | 8799.51 |
| hypothetical protein | TM1040_RS08230 | Not Available | - | 839023 - 839229 | 7650.0 |
| hypothetical protein | TM1040_RS08235 | Not Available | - | 839240 - 839599 | 13412.4 |
| hypothetical protein | TM1040_RS08240 | Not Available | - | 839907 - 840665 | 27398.4 |
| duf2794 domain-containing protein | TM1040_RS20610 | Not Available | - | 840662 - 841195 | 20045.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.