Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria sp. TM1040 |
| Strain | TM1040 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Pfiesteria piscicida |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria sp. TM1040
Accession NumberNC_008043.1
Gene Summary
Adenine Count
167632 bp
Thymine Count
166322 bp
Guanine Count
242456 bp
Cytosine Count
245378 bp
Genome Length
821788 bp
Protein-coding Genes
731 genes
Non-Coding Genes
27 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | TM1040_RS20210 | Not Available | + | 806004 - 806159 | 5721.9 |
| transcription elongation factor grea | TM1040_RS04200 | Not Available | + | 806339 - 806809 | 17059.1 |
| hypothetical protein | TM1040_RS04205 | Not Available | + | 806846 - 807877 | 37665.1 |
| gnat family n-acetyltransferase | TM1040_RS04210 | Not Available | + | 807902 - 808414 | 18610.0 |
| gephyrin-like molybdotransferase glp | TM1040_RS04215 | Not Available | - | 808645 - 809904 | 43748.3 |
| hypothetical protein | TM1040_RS04220 | Not Available | - | 809901 - 810713 | 30035.8 |
| molybdopterin-guanine dinucleotide biosynthesis protein b | TM1040_RS04225 | Not Available | - | 810734 - 811225 | 17729.2 |
| molybdenum cofactor guanylyltransferase moba | TM1040_RS04230 | Not Available | - | 811225 - 811860 | 22295.6 |
| hypothetical protein | TM1040_RS04235 | Not Available | - | 811857 - 812315 | 17550.6 |
| formate dehydrogenase accessory sulfurtransferase fdhd | TM1040_RS04240 | Not Available | - | 812413 - 813294 | 32521.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.