Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria sp. TM1040 |
| Strain | TM1040 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Pfiesteria piscicida |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria sp. TM1040
Accession NumberNC_008043.1
Gene Summary
Adenine Count
167632 bp
Thymine Count
166322 bp
Guanine Count
242456 bp
Cytosine Count
245378 bp
Genome Length
821788 bp
Protein-coding Genes
731 genes
Non-Coding Genes
27 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | TM1040_RS03625 | Not Available | + | 689022 - 689693 | 24974.1 |
| molybdopterin converting factor subunit 1 | TM1040_RS03630 | Not Available | + | 689693 - 689938 | 9003.72 |
| molybdenum cofactor biosynthesis protein moae | TM1040_RS03635 | Not Available | + | 689943 - 690389 | 16115.1 |
| Trna-thr | Not Available | Not Available | + | 690461 - 690536 | Not Available |
| lysr family transcriptional regulator | TM1040_RS03645 | Not Available | - | 690768 - 691682 | 33897.9 |
| extracellular solute-binding protein | TM1040_RS03650 | Not Available | + | 691965 - 693041 | 38613.3 |
| abc transporter atp-binding protein | TM1040_RS03655 | Not Available | + | 693110 - 694219 | 39981.1 |
| abc transporter permease | TM1040_RS03660 | Not Available | + | 694219 - 695085 | 31742.8 |
| abc transporter permease | TM1040_RS03665 | Not Available | + | 695082 - 695942 | 31045.7 |
| trap transporter large permease subunit | TM1040_RS03670 | Not Available | - | 696015 - 697565 | 54161.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.