Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria sp. TM1040 |
| Strain | TM1040 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Pfiesteria piscicida |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria sp. TM1040
Accession NumberNC_008043.1
Gene Summary
Adenine Count
167632 bp
Thymine Count
166322 bp
Guanine Count
242456 bp
Cytosine Count
245378 bp
Genome Length
821788 bp
Protein-coding Genes
731 genes
Non-Coding Genes
27 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | TM1040_RS00200 | Not Available | + | 52469 - 53038 | 20435.8 |
| tmem43 family protein | TM1040_RS00205 | Not Available | + | 53072 - 54244 | 41870.7 |
| hypothetical protein | TM1040_RS00210 | Not Available | + | 54278 - 54745 | 16305.3 |
| hypothetical protein | TM1040_RS00215 | Not Available | + | 54757 - 55578 | 30009.2 |
| duf4453 domain-containing protein | TM1040_RS00220 | Not Available | + | 55655 - 56197 | 19104.5 |
| hypothetical protein | TM1040_RS00225 | Not Available | + | 56206 - 56622 | 14172.8 |
| hypothetical protein | TM1040_RS00230 | Not Available | + | 56625 - 57533 | 32145.6 |
| hypothetical protein | TM1040_RS00235 | Not Available | + | 57539 - 58570 | 37075.4 |
| hypothetical protein | TM1040_RS00240 | Not Available | + | 58658 - 59440 | 28770.2 |
| autoinducer binding domain-containing protein | TM1040_RS00245 | Not Available | + | 59718 - 60518 | 30393.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.