Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria sp. TM1040 |
| Strain | TM1040 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Pfiesteria piscicida |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria sp. TM1040
Accession NumberNC_008043.1
Gene Summary
Adenine Count
167632 bp
Thymine Count
166322 bp
Guanine Count
242456 bp
Cytosine Count
245378 bp
Genome Length
821788 bp
Protein-coding Genes
731 genes
Non-Coding Genes
27 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| flagellar biosynthesis repressor flbt | TM1040_RS19310 | Not Available | - | 3138244 - 3138648 | 15045.2 |
| flagellar biosynthesis regulator flaf | TM1040_RS19315 | Not Available | - | 3138651 - 3139022 | 13625.5 |
| flagellin | TM1040_RS19320 | Not Available | - | 3139109 - 3139957 | 29002.9 |
| flagellar protein flgn | TM1040_RS19325 | Not Available | - | 3140173 - 3140541 | 13330.9 |
| rod-binding protein | TM1040_RS19330 | Not Available | - | 3140538 - 3140828 | 9744.41 |
| flagellar hook-length control protein flik | TM1040_RS19335 | Not Available | + | 3140954 - 3142540 | 54834.9 |
| flagellar hook capping flgd n-terminal domain-containing protein | TM1040_RS19340 | Not Available | + | 3142545 - 3143240 | 24280.8 |
| phosphotransferase family protein | TM1040_RS19345 | Not Available | + | 3143305 - 3144138 | 30687.5 |
| nad(p)/fad-dependent oxidoreductase | TM1040_RS19350 | Not Available | - | 3144135 - 3145442 | 47282.0 |
| abc transporter permease | TM1040_RS19355 | Not Available | - | 3145439 - 3146257 | 29388.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.