Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria sp. TM1040 |
| Strain | TM1040 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Pfiesteria piscicida |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria sp. TM1040
Accession NumberNC_008043.1
Gene Summary
Adenine Count
167632 bp
Thymine Count
166322 bp
Guanine Count
242456 bp
Cytosine Count
245378 bp
Genome Length
821788 bp
Protein-coding Genes
731 genes
Non-Coding Genes
27 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mote family protein | TM1040_RS19200 | Not Available | + | 3118616 - 3119233 | 21892.5 |
| flagellar motor stator protein mota | TM1040_RS19205 | Not Available | + | 3119308 - 3120177 | 31132.3 |
| hypothetical protein | TM1040_RS19210 | Not Available | + | 3120174 - 3122588 | 87582.1 |
| flagellar biosynthesis protein flha | TM1040_RS19215 | Not Available | + | 3122974 - 3125013 | 73342.1 |
| flagellar biosynthetic protein flir | TM1040_RS19220 | Not Available | + | 3125010 - 3125789 | 27253.6 |
| flagellar type iii secretion system protein flhb | TM1040_RS19225 | Not Available | + | 3125786 - 3126877 | 39788.5 |
| hypothetical protein | TM1040_RS19230 | Not Available | + | 3126874 - 3127278 | 15827.2 |
| flagellar basal body-associated flil family protein | TM1040_RS19235 | Not Available | - | 3127555 - 3128064 | 18688.6 |
| flagellar basal body l-ring protein flgh | TM1040_RS19240 | Not Available | - | 3128076 - 3128813 | 26199.1 |
| flagellar basal body p-ring formation chaperone flga | TM1040_RS19245 | Not Available | - | 3128813 - 3129229 | 14851.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.