Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria sp. TM1040 |
| Strain | TM1040 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Pfiesteria piscicida |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria sp. TM1040
Accession NumberNC_008043.1
Gene Summary
Adenine Count
167632 bp
Thymine Count
166322 bp
Guanine Count
242456 bp
Cytosine Count
245378 bp
Genome Length
821788 bp
Protein-coding Genes
731 genes
Non-Coding Genes
27 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| flagellar hook protein flge | TM1040_RS19150 | Not Available | + | 3108809 - 3110077 | 43692.4 |
| flagellar hook-associated protein flgk | TM1040_RS19155 | Not Available | + | 3110129 - 3111577 | 51548.2 |
| flagellin | TM1040_RS19160 | Not Available | + | 3111581 - 3112588 | 36326.5 |
| flagellar basal body p-ring protein flgi | TM1040_RS19165 | Not Available | + | 3112588 - 3113691 | 38632.4 |
| flagellar type iii secretion system pore protein flip | TM1040_RS19170 | Not Available | - | 3114200 - 3114946 | 27104.0 |
| flim/flin family flagellar motor switch protein | TM1040_RS19175 | Not Available | - | 3114943 - 3115239 | 10469.5 |
| abc transporter atp-binding protein | TM1040_RS19180 | Not Available | - | 3115232 - 3115828 | 21730.3 |
| flagellar basal-body ms-ring/collar protein flif | TM1040_RS19185 | Not Available | - | 3115828 - 3117504 | 58438.0 |
| flagellar basal body-associated protein flil | TM1040_RS19190 | Not Available | + | 3117624 - 3118148 | 18871.9 |
| hypothetical protein | TM1040_RS19195 | Not Available | + | 3118158 - 3118616 | 16126.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.