Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria sp. TM1040 |
| Strain | TM1040 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Pfiesteria piscicida |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria sp. TM1040
Accession NumberNC_008043.1
Gene Summary
Adenine Count
167632 bp
Thymine Count
166322 bp
Guanine Count
242456 bp
Cytosine Count
245378 bp
Genome Length
821788 bp
Protein-coding Genes
731 genes
Non-Coding Genes
27 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| response regulator | TM1040_RS01445 | Not Available | - | 198295 - 198681 | 13912.2 |
| cher family methyltransferase | TM1040_RS01450 | Not Available | - | 198725 - 199582 | 32086.6 |
| chemotaxis protein chew | TM1040_RS01455 | Not Available | - | 199579 - 200067 | 17834.5 |
| chemotaxis protein chea | TM1040_RS01460 | Not Available | - | 200051 - 202186 | 76399.5 |
| response regulator | TM1040_RS01465 | Not Available | - | 202188 - 202562 | 13411.0 |
| stas domain-containing protein | TM1040_RS01470 | Not Available | - | 202559 - 202846 | 10510.5 |
| methyl-accepting chemotaxis protein | TM1040_RS01475 | Not Available | + | 203191 - 205539 | 84445.1 |
| cheb methylesterase domain-containing protein | TM1040_RS01480 | Not Available | + | 205699 - 206634 | 33432.7 |
| chemoreceptor glutamine deamidase ched | TM1040_RS01485 | Not Available | + | 206661 - 207224 | 19592.4 |
| tetr/acrr family transcriptional regulator | TM1040_RS01490 | Not Available | + | 207380 - 208021 | 23783.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.