Bradyrhizobium pachyrhizi str. BR3262

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Bradyrhizobium

Description

Bradyrhizobium pachyrhizi str. BR3262 is a Gram-negative, rod-shaped bacterium that exhibits aerobic metabolism and thrives optimally at a temperature of 29.0°C. As a member of the genus Bradyrhizobium, this strain is part of a group of bacteria known for their symbiotic relationships with leguminous plants, facilitating nitrogen fixation, which is crucial for soil fertility. The rod shape of B. pachyrhizi str. BR3262 is characteristic of many bacteria within the Rhizobiaceae family, contributing to its adaptability in various environments. The aerobic requirement of this strain indicates that it utilizes oxygen for its metabolic processes, which may influence its distribution and survival in soil ecosystems. This trait, coupled with its optimal growth temperature, suggests that B. pachyrhizi str. BR3262 may play a significant role in specific climatic regions that provide favorable conditions for its growth and activity. Understanding the physiological traits of B. pachyrhizi str. BR3262 enhances our comprehension of its ecological niche, particularly its potential contributions to sustainable agriculture through its interactions with host plants. This strain's specific temperature preference and oxygen requirements may also inform agricultural practices aimed at optimizing nodulation and nitrogen fixation, ultimately benefiting crop yields in suitable environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusBradyrhizobium
SpeciesBradyrhizobium pachyrhizi
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bradyrhizobium pachyrhizi str. BR3262

Accession NumberLJYE00000000.1

Gene Summary

Adenine Count

1618107 bp

Thymine Count

1627049 bp

Guanine Count

2863729 bp

Cytosine Count

2846409 bp

Genome Length

8965178 bp

Protein-coding Genes

7570 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
pyrroloquinoline quinone biosynthesis protein pqqeAOQ73_00310Q89FG1-86399 - 8764345781.1
pyrroloquinoline quinone biosynthesis protein pqqdAOQ73_00315Q89FG2-87640 - 8794811354.7
16s ribosomal rnaNot AvailableNot Available+88490 - 89986Not Available
pyrroloquinoline quinone biosynthesis protein pqqdAOQ73_00320Q89FG3-88015 - 8877028474.9
pyrroloquinoline quinone biosynthesis protein pqqbAOQ73_00325Q89FG4-88791 - 8972032640.0
hypothetical proteinAOQ73_00330Not Available+90286 - 905439724.49
sorbosone dehydrogenaseAOQ73_00335O51055+90912 - 9197638861.3
cytochrome cAOQ73_00340Not Available+92088 - 9265420802.6
amidaseAOQ73_00345P59385+92726 - 9411748995.9
glutathione peroxidaseAOQ73_00350P74250+94119 - 9459517138.6

Displaying genes 61 – 70 of 7627 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

507 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000198tetracenomycin CC23H20O11Chemical structure of tetracenomycin CNot available
Average472.402Da
Monoisotopic472.100561464Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002634-(hydroxymethyl)benzenesulfonateC7H7O4SChemical structure of 4-(hydroxymethyl)benzenesulfonateNot available
Average187.19Da
Monoisotopic187.007053459Da

Displaying 1–10 of 507 metabolites