Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas arenae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Collimonas arenae str. Cal35
Accession NumberNZ_CP009963.1
Gene Summary
Adenine Count
10301 bp
Thymine Count
10196 bp
Guanine Count
10010 bp
Cytosine Count
10933 bp
Genome Length
41440 bp
Protein-coding Genes
51 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| llm class flavin-dependent oxidoreductase | LT85_RS00450 | Not Available | + | 102386 - 103381 | 36051.3 |
| 1-aminocyclopropane-1-carboxylate deaminase/d-cysteine desulfhydrase | LT85_RS00455 | Not Available | + | 103399 - 104313 | 33423.3 |
| hypothetical protein | LT85_RS00460 | Not Available | - | 104300 - 104566 | 9704.6 |
| lysr substrate-binding domain-containing protein | LT85_RS00465 | Not Available | + | 104679 - 105671 | 36227.9 |
| hypothetical protein | LT85_RS00470 | Not Available | + | 105787 - 106059 | 9573.71 |
| pp_00098 | LT85_RS00475 | Not Available | + | 106275 - 106892 | Not Available |
| phosphoribosyltransferase | LT85_RS00480 | Not Available | - | 106940 - 107602 | 24403.6 |
| universal stress protein | LT85_RS00485 | Not Available | - | 107684 - 108121 | 16062.3 |
| alanine transaminase | LT85_RS00490 | Not Available | + | 108511 - 109710 | 44808.3 |
| type vi secretion system-associated fha domain protein tagh | LT85_RS25740 | Not Available | + | 110272 - 111474 | 43681.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.