Mycolicibacterium gilvum Spyr1

Gram-positiveRodNon-motileAerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Mycobacteriaceae

Genus

Mycolicibacterium

Description

Mycolicibacterium gilvum Spyr1 is a Gram-positive, rod-shaped bacterium that exists as single cells and exhibits aerobic metabolism. This microbe is classified as a chemoorganotroph, indicating that it derives its energy from organic compounds, which is consistent with its terrestrial habitat. The Gram-positive nature of M. gilvum Spyr1 suggests the presence of a thick peptidoglycan layer in its cell wall, a characteristic that often influences its resilience in various environments. The rod shape and solitary arrangement of the cells may provide advantages in nutrient uptake and metabolic efficiency, particularly in aerobic conditions where oxygen is readily available. While specific ecological roles of M. gilvum Spyr1 have not been detailed, its terrestrial habitat implies a potential involvement in soil microbiomes, where it could contribute to organic matter decomposition or nutrient cycling. Understanding its metabolic capabilities may reveal insights into its interactions within microbial communities, especially in relation to organic substrates in terrestrial ecosystems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyMycobacteriaceae
GenusMycolicibacterium
SpeciesMycolicibacterium gilvum
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Mycolicibacterium gilvum Spyr1
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatTerrestrial
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityNot Available

Genome Summary

Mycolicibacterium gilvum Spyr1

Accession NumberNC_014814.1

Gene Summary

Adenine Count

887837 bp

Thymine Count

895336 bp

Guanine Count

1882443 bp

Cytosine Count

1882131 bp

Genome Length

5547747 bp

Protein-coding Genes

5264 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
chromosomal replication initiator protein dnaaMSPYR1_RS00010Not Available+244 - 171654998.3
dna polymerase iii subunit betaMSPYR1_RS00015Not Available+2282 - 347841547.6
phosphogluconate dehydrogenase (nad(+)-dependent, decarboxylating)MSPYR1_RS00020Not Available+3512 - 440531984.0
dna replication/repair protein recfMSPYR1_RS00025Not Available+4418 - 558742205.1
duf721 family proteinMSPYR1_RS00030Not Available+5584 - 615019953.6
dna topoisomerase (atp-hydrolyzing) subunit bMSPYR1_RS00035Not Available+6386 - 841374420.3
intein-containing dna gyrase subunit aMSPYR1_RS00040Not Available+8445 - 12230139637.0
duf3566 domain-containing proteinMSPYR1_RS00045Not Available+12231 - 1317532453.3
Trna-ileNot AvailableNot Available+13247 - 13320Not Available
Trna-alaNot AvailableNot Available+13456 - 13528Not Available

Displaying genes 1 – 10 of 5553 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0014029(S)-3-Hydroxyisobutyric acidC19H35N5O6SeChemical structure of (S)-3-Hydroxyisobutyric acid26543-05-5
Average508.489Da
Monoisotopic509.175256Da

Displaying 1–1 of 1 metabolites