Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Thermococci
Order
Thermococcales
Family
Thermococcaceae
Genus
Pyrococcus
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Thermococci |
| Order | Thermococcales |
| Family | Thermococcaceae |
| Genus | Pyrococcus |
| Species | Pyrococcus abyssi |
| Strain | GE5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 103 |
| Temperature range | Hyperthermophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Pyrococcus abyssi GE5
Accession NumberNC_001773.1
Gene Summary
Adenine Count
747 bp
Thymine Count
1201 bp
Guanine Count
832 bp
Cytosine Count
664 bp
Genome Length
3444 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alanine--glyoxylate aminotransferase family protein | PAB_RS04475 | Not Available | - | 796428 - 797579 | 43170.7 |
| serine/threonine protein kinase | PAB_RS04480 | Not Available | + | 797632 - 798282 | 24982.6 |
| hypothetical protein | PAB_RS04485 | Not Available | - | 798272 - 798565 | 10819.0 |
| 50s ribosomal protein l40e | PAB_RS04490 | Not Available | + | 798653 - 798808 | 5885.29 |
| methylmalonyl-coa mutase | PAB_RS04495 | Not Available | - | 798836 - 800524 | 64495.4 |
| 5s ribosomal rna | Not Available | Not Available | + | 800617 - 800738 | Not Available |
| dicarboxylate/amino acid:cation symporter | PAB_RS04505 | Not Available | - | 800820 - 802097 | 44782.7 |
| ubid family decarboxylase | PAB_RS04510 | Not Available | - | 802255 - 803517 | 47349.2 |
| trna pseudouridine(54/55) synthase pus10 | PAB_RS04515 | Not Available | - | 803489 - 804670 | 45513.3 |
| translation initiation factor if-2 subunit alpha | PAB_RS04520 | Not Available | + | 804736 - 805563 | 31913.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.