Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Thermococci
Order
Thermococcales
Family
Thermococcaceae
Genus
Pyrococcus
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Thermococci |
| Order | Thermococcales |
| Family | Thermococcaceae |
| Genus | Pyrococcus |
| Species | Pyrococcus abyssi |
| Strain | GE5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 103 |
| Temperature range | Hyperthermophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Pyrococcus abyssi GE5
Accession NumberNC_001773.1
Gene Summary
Adenine Count
747 bp
Thymine Count
1201 bp
Guanine Count
832 bp
Cytosine Count
664 bp
Genome Length
3444 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| upf0179 family protein | PAB_RS03660 | Not Available | - | 643107 - 643535 | 16062.0 |
| nad(p)-dependent glycerol-1-phosphate dehydrogenase | PAB_RS03665 | Not Available | - | 643548 - 644588 | 37415.9 |
| Trna-undet | Not Available | Not Available | + | 644645 - 644753 | Not Available |
| sugar phosphate isomerase/epimerase family protein | PAB_RS03675 | Not Available | + | 644827 - 645630 | 29593.5 |
| hypothetical protein | PAB_RS03680 | Not Available | + | 645635 - 645994 | 14264.2 |
| type-4 uracil-dna glycosylase | PAB_RS03685 | Not Available | + | 646021 - 646590 | 21822.9 |
| helix-turn-helix domain-containing protein | PAB_RS03690 | Not Available | + | 646636 - 647355 | 26514.4 |
| 4-phosphopantoate--beta-alanine ligase | PAB_RS03695 | Not Available | - | 647347 - 648129 | 29610.4 |
| osmc family protein | PAB_RS03700 | Not Available | - | 648191 - 648622 | 16247.9 |
| spl family radical sam protein | PAB_RS03705 | Not Available | + | 648684 - 649517 | 32466.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.