Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Thermococci
Order
Thermococcales
Family
Thermococcaceae
Genus
Pyrococcus
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Thermococci |
| Order | Thermococcales |
| Family | Thermococcaceae |
| Genus | Pyrococcus |
| Species | Pyrococcus abyssi |
| Strain | GE5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 103 |
| Temperature range | Hyperthermophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Pyrococcus abyssi GE5
Accession NumberNC_001773.1
Gene Summary
Adenine Count
747 bp
Thymine Count
1201 bp
Guanine Count
832 bp
Cytosine Count
664 bp
Genome Length
3444 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pyridoxal-phosphate dependent enzyme | PAB_RS02875 | Not Available | + | 509908 - 510939 | 38424.6 |
| memo1 family protein | PAB_RS02880 | Not Available | + | 510974 - 511849 | 32516.9 |
| nfed family protein | PAB_RS02885 | Not Available | + | 511852 - 512226 | 13939.0 |
| mevalonate kinase | PAB_RS02890 | Not Available | + | 512229 - 513236 | 35776.6 |
| isopentenyl phosphate kinase | PAB_RS02895 | Not Available | + | 513233 - 513997 | 28037.4 |
| atp-dependent dna ligase | PAB_RS02900 | Not Available | - | 514003 - 515682 | 63556.7 |
| osmc family protein | PAB_RS02905 | Not Available | - | 515724 - 516155 | 15892.5 |
| lipoate protein ligase c-terminal domain-containing protein | PAB_RS02910 | Not Available | + | 516274 - 516555 | 10853.2 |
| stage ii sporulation protein m | PAB_RS02915 | Not Available | + | 516552 - 517112 | 20443.3 |
| duf354 domain-containing protein | PAB_RS02920 | Not Available | - | 517023 - 518135 | 42309.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.