Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Thermococci
Order
Thermococcales
Family
Thermococcaceae
Genus
Pyrococcus
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Thermococci |
| Order | Thermococcales |
| Family | Thermococcaceae |
| Genus | Pyrococcus |
| Species | Pyrococcus abyssi |
| Strain | GE5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 103 |
| Temperature range | Hyperthermophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Pyrococcus abyssi GE5
Accession NumberNC_001773.1
Gene Summary
Adenine Count
747 bp
Thymine Count
1201 bp
Guanine Count
832 bp
Cytosine Count
664 bp
Genome Length
3444 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf835 domain-containing protein | PAB_RS01615 | Not Available | + | 312060 - 312788 | 27408.3 |
| duf4139 domain-containing protein | PAB_RS01620 | Not Available | + | 312863 - 314116 | 47118.6 |
| sdr family oxidoreductase | PAB_RS01625 | Not Available | - | 314094 - 315017 | 34049.8 |
| had family hydrolase | PAB_RS01630 | Not Available | + | 315073 - 315732 | 25519.1 |
| hypothetical protein | PAB_RS01635 | Not Available | - | 315713 - 315982 | 10377.5 |
| arsr/smtb family transcription factor | PAB_RS01640 | Not Available | + | 316073 - 316678 | 24143.7 |
| gar1/naf1 family protein | PAB_RS01645 | Not Available | + | 316710 - 316994 | 10952.7 |
| metallophosphoesterase | PAB_RS01650 | Not Available | + | 317020 - 317511 | 18443.5 |
| crispr-associated protein cas4 | PAB_RS01655 | Not Available | - | 317508 - 318110 | 23804.3 |
| Ncrna_class:snorna | Not Available | Not Available | + | 318126 - 318181 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.