Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Thermococci
Order
Thermococcales
Family
Thermococcaceae
Genus
Pyrococcus
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Thermococci |
| Order | Thermococcales |
| Family | Thermococcaceae |
| Genus | Pyrococcus |
| Species | Pyrococcus abyssi |
| Strain | GE5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 103 |
| Temperature range | Hyperthermophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Pyrococcus abyssi GE5
Accession NumberNC_001773.1
Gene Summary
Adenine Count
747 bp
Thymine Count
1201 bp
Guanine Count
832 bp
Cytosine Count
664 bp
Genome Length
3444 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PAB_RS10000 | Not Available | - | 878093 - 878278 | 6558.15 |
| ribbon-helix-helix domain-containing protein | PAB_RS04875 | Not Available | - | 878196 - 878597 | 15417.4 |
| duf3267 domain-containing protein | PAB_RS04880 | Not Available | - | 878856 - 879473 | 22847.0 |
| polyprenyl synthetase family protein | PAB_RS04885 | Not Available | - | 879474 - 880514 | 38827.0 |
| rnase j family beta-casp ribonuclease | PAB_RS04890 | Not Available | - | 880511 - 881848 | 49717.3 |
| acetamidase/formamidase family protein | PAB_RS04895 | Not Available | + | 881958 - 882845 | 32116.1 |
| trna(phe) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-n(4))- methyltransferase taw3 | PAB_RS04900 | Not Available | + | 882871 - 883455 | 22570.5 |
| ferritin family protein | PAB_RS04905 | Not Available | - | 883452 - 883955 | 19670.1 |
| isoleucine--trna ligase | PAB_RS04910 | Not Available | + | 884230 - 887433 | 126116.0 |
| hypothetical protein | PAB_RS04915 | Not Available | - | 887462 - 888229 | 29435.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.