Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Thermococci
Order
Thermococcales
Family
Thermococcaceae
Genus
Pyrococcus
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Thermococci |
| Order | Thermococcales |
| Family | Thermococcaceae |
| Genus | Pyrococcus |
| Species | Pyrococcus abyssi |
| Strain | GE5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 103 |
| Temperature range | Hyperthermophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Pyrococcus abyssi GE5
Accession NumberNC_001773.1
Gene Summary
Adenine Count
747 bp
Thymine Count
1201 bp
Guanine Count
832 bp
Cytosine Count
664 bp
Genome Length
3444 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| d-2-hydroxyacid dehydrogenase | PAB_RS04050 | Not Available | + | 715264 - 716178 | 33283.8 |
| 1,4-alpha-glucan branching protein | PAB_RS04055 | Not Available | - | 716251 - 718059 | 70222.8 |
| fe-s cluster assembly protein sufb | PAB_RS04060 | Not Available | - | 718114 - 719454 | 50015.0 |
| fe-s cluster assembly atpase sufc | PAB_RS04065 | Not Available | - | 719447 - 720190 | 27579.7 |
| nifb/nifx family molybdenum-iron cluster-binding protein | PAB_RS04070 | Not Available | + | 720312 - 720728 | 14477.4 |
| mbl fold metallo-hydrolase | PAB_RS04075 | Not Available | + | 720722 - 721531 | 29843.1 |
| translation initiation factor if-5a | PAB_RS04080 | Not Available | - | 721538 - 721954 | 15315.6 |
| sodium-dependent transporter | PAB_RS04085 | Not Available | - | 722000 - 723367 | 50029.8 |
| 16s rrna methyltransferase | PAB_RS04090 | Not Available | - | 723417 - 724115 | 27170.3 |
| abrb/maze/spovt family dna-binding domain-containing protein | PAB_RS04095 | Not Available | + | 724259 - 724486 | 8869.01 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.