Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Thermococci
Order
Thermococcales
Family
Thermococcaceae
Genus
Pyrococcus
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Thermococci |
| Order | Thermococcales |
| Family | Thermococcaceae |
| Genus | Pyrococcus |
| Species | Pyrococcus abyssi |
| Strain | GE5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 103 |
| Temperature range | Hyperthermophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Pyrococcus abyssi GE5
Accession NumberNC_001773.1
Gene Summary
Adenine Count
747 bp
Thymine Count
1201 bp
Guanine Count
832 bp
Cytosine Count
664 bp
Genome Length
3444 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetyl-d-mannosamine dehydrogenase | PAB_RS02925 | Not Available | + | 518382 - 519638 | 46210.3 |
| non-hydrolyzing udp-n-acetylglucosamine 2-epimerase | PAB_RS02930 | Not Available | + | 519635 - 520780 | 42713.3 |
| metallophosphoesterase family protein | PAB_RS02935 | Not Available | - | 520758 - 521450 | 26600.1 |
| radical sam protein | PAB_RS02940 | Not Available | - | 521573 - 522832 | 47936.7 |
| glycine--trna ligase | PAB_RS02945 | Not Available | + | 522896 - 524611 | 66619.7 |
| hypothetical protein | PAB_RS02950 | Not Available | - | 524708 - 525274 | 20922.8 |
| duf402 domain-containing protein | PAB_RS02955 | Not Available | + | 525421 - 525936 | 19822.2 |
| duf356 domain-containing protein | PAB_RS02960 | Not Available | - | 525925 - 526311 | 14459.9 |
| pyruvoyl-dependent arginine decarboxylase | PAB_RS02965 | Not Available | + | 526454 - 526930 | 17066.9 |
| 7-cyano-7-deazaguanine synthase | PAB_RS02970 | Not Available | - | 526914 - 527696 | 30250.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.