Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Thermococci
Order
Thermococcales
Family
Thermococcaceae
Genus
Pyrococcus
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Thermococci |
| Order | Thermococcales |
| Family | Thermococcaceae |
| Genus | Pyrococcus |
| Species | Pyrococcus abyssi |
| Strain | GE5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 103 |
| Temperature range | Hyperthermophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Pyrococcus abyssi GE5
Accession NumberNC_001773.1
Gene Summary
Adenine Count
747 bp
Thymine Count
1201 bp
Guanine Count
832 bp
Cytosine Count
664 bp
Genome Length
3444 bp
Protein-coding Genes
2 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| radical sam protein | PAB_RS06510 | Not Available | - | 1168819 - 1169646 | 31498.8 |
| tyrosine decarboxylase mfna | PAB_RS06515 | Not Available | - | 1169643 - 1170797 | 42889.6 |
| diacylglycerol/polyprenol kinase family protein | PAB_RS06520 | Not Available | - | 1170794 - 1171405 | 22356.0 |
| had family hydrolase | PAB_RS06525 | Not Available | - | 1171383 - 1172075 | 27205.4 |
| tigr00304 family membrane protein | PAB_RS06530 | Not Available | + | 1172127 - 1172378 | 8915.7 |
| cation:proton antiporter | PAB_RS06535 | Not Available | + | 1172380 - 1173552 | 42810.7 |
| dna double-strand break repair helicase hera | PAB_RS06540 | Not Available | + | 1173575 - 1175221 | 61425.7 |
| dna double-strand break repair protein mre11 | PAB_RS06545 | Not Available | + | 1175232 - 1176479 | 48081.6 |
| dna double-strand break repair atpase rad50 | PAB_RS06550 | Not Available | + | 1176484 - 1179126 | 103977.0 |
| dna double-strand break repair nuclease nura | PAB_RS06555 | Not Available | + | 1179123 - 1180478 | 52084.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.