Methylorubrum extorquens AM1

Gram-negativeRodMotileFacultative aerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Methylobacteriaceae

Genus

Methylorubrum

Description

Methylorubrum extorquens AM1 is a Gram-negative, rod-shaped bacterium that exhibits a versatile metabolic capacity as a methylotroph, utilizing single-carbon compounds as its primary energy source. This microbe can adapt to various habitats, demonstrating a remarkable ability to thrive in diverse environmental conditions. Methylorubrum extorquens AM1 typically exists as single cells or in pairs, reflecting its flexible cellular arrangement. Optimal growth temperature for this organism is approximately 25.0°C, which suggests a preference for moderate environmental temperatures. As a facultative aerobe, Methylorubrum extorquens AM1 can grow in both the presence and absence of oxygen, which allows it to occupy a range of ecological niches, potentially including both aerobic and microaerophilic environments. The metabolic versatility of Methylorubrum extorquens AM1 not only enables it to utilize methanol and other methylated compounds but also positions it as a potential player in biotechnological applications, such as bioremediation and carbon cycling. Its ability to thrive in varied conditions underscores the ecological significance of methylotrophic bacteria in global carbon dynamics, particularly in environments where organic carbon is limited.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyMethylobacteriaceae
GenusMethylorubrum
SpeciesMethylorubrum extorquens
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Methylorubrum extorquens AM1
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative aerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceMethylotroph
PathogenicityNot Available

Genome Summary

Methylorubrum extorquens AM1

Accession NumberNC_012809.1

Gene Summary

Adenine Count

6482 bp

Thymine Count

6674 bp

Guanine Count

12299 bp

Cytosine Count

12403 bp

Genome Length

37858 bp

Protein-coding Genes

33315 genes

Non-Coding Genes

4543 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
phosphoribosylformylglycinamidine synthase subunit purlMEXAM1_RS00050A4YRR9+12844 - 1506977902.1
bola family proteinMEXAM1_RS00055Not Available+15097 - 153338331.06
grx4 family monothiol glutaredoxinMEXAM1_RS00060Q92GH5+15407 - 1574212166.7
nad(p)/fad-dependent oxidoreductaseMEXAM1_RS00065M1W428+15815 - 1671732325.2
smp-30/gluconolactonase/lre family proteinMEXAM1_RS00070Q9A9Z1+16826 - 1771031965.8
hypothetical proteinMEXAM1_RS00075Not Available+17896 - 181117786.6
hypothetical proteinMEXAM1_RS00080Not Available-18139 - 1897529379.0
pas domain-containing hybrid sensor histidine kinase/response regulatorMEXAM1_RS00085Not Available-19345 - 2139074679.0
atpase domain-containing proteinMEXAM1_RS00090Not Available-21390 - 2291655499.8
duf2252 family proteinMEXAM1_RS00095Not Available+23303 - 2450844019.8

Displaying genes 121 – 130 of 6496 in total

Pathways

23 pathways

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm00069174-(hydroxymethyl)-2-furancarboxaldehyde phosphateC6H5O6PChemical structure of 4-(hydroxymethyl)-2-furancarboxaldehyde phosphateNot available
Average204.075Da
Monoisotopic203.983472039Da

Displaying 1–1 of 1 metabolites