Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylorubrum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylorubrum |
| Species | Methylorubrum extorquens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Methylotroph |
| Pathogenicity | Not Available |
Genome Summary
Methylorubrum extorquens AM1 str. DM4
Accession NumberNC_012988.1
Gene Summary
Adenine Count
951584 bp
Thymine Count
945195 bp
Guanine Count
2018616 bp
Cytosine Count
2028373 bp
Genome Length
5943768 bp
Protein-coding Genes
5551 genes
Non-Coding Genes
90 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Gene transfer aget (gta) orfg9-like phage major tail protein | METD_RS09070 | Not Available | - | 1967297 - 1967707 | 14355.0 |
| Gene transfer agent (gta) orfg8-like protein | METD_RS09075 | Not Available | - | 1967737 - 1968156 | 14611.5 |
| head-tail adaptor protein | METD_RS09080 | Not Available | - | 1968153 - 1968494 | 12518.0 |
| head-tail connector protein | METD_RS09085 | Not Available | - | 1968517 - 1969092 | 20040.5 |
| trypsin-like serine protease | METD_RS09090 | Not Available | + | 1969126 - 1969881 | 25361.7 |
| s1 family peptidase | METD_RS09095 | Not Available | + | 1970029 - 1970877 | 29699.8 |
| Major capsid protein | METD_RS09100 | Not Available | - | 1970884 - 1972149 | 45475.9 |
| Putative prohead protease | METD_RS09105 | Not Available | - | 1972182 - 1972652 | 16888.5 |
| Portal protein | METD_RS09110 | Not Available | - | 1972710 - 1973882 | 41762.7 |
| Large packaging protein | METD_RS09115 | Not Available | - | 1973929 - 1975194 | 45267.3 |
Pathways
23 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling