Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Methylobacteriaceae
Genus
Methylorubrum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Methylobacteriaceae |
| Genus | Methylorubrum |
| Species | Methylorubrum extorquens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Methylotroph |
| Pathogenicity | Not Available |
Genome Summary
Methylorubrum extorquens AM1 str. DM4
Accession NumberNC_012988.1
Gene Summary
Adenine Count
951584 bp
Thymine Count
945195 bp
Guanine Count
2018616 bp
Cytosine Count
2028373 bp
Genome Length
5943768 bp
Protein-coding Genes
5551 genes
Non-Coding Genes
90 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent epimerase/dehydratase family protein | METD_RS00650 | Not Available | - | 135524 - 136615 | 38828.3 |
| sdr family nad(p)-dependent oxidoreductase | METD_RS00655 | Not Available | - | 136612 - 137724 | 39843.7 |
| hypothetical protein | METD_RS29945 | Not Available | - | 138133 - 138285 | 5457.64 |
| duf6538 domain-containing protein | METD_RS28290 | Not Available | - | 138526 - 139065 | 20904.5 |
| is3 family transposase | METD_RS00670 | Not Available | + | 139254 - 140395 | 43603.7 |
| is110-like element ismex17 family transposase | METD_RS00675 | Not Available | + | 140581 - 141510 | 33648.0 |
| hypothetical protein | METD_RS00680 | Not Available | - | 141558 - 141773 | 7742.55 |
| lexa family protein | METD_RS00685 | Not Available | + | 141912 - 142367 | 16498.6 |
| hypothetical protein | METD_RS00690 | Not Available | + | 142364 - 143695 | 48391.3 |
| glycosyltransferase | METD_RS28510 | Not Available | - | 143998 - 145074 | 40961.4 |
Pathways
23 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling